Idaho’s Response

Through ISDA’s Early Detection Monitoring Program, quagga mussels were confirmed in the Twin Falls area of the Snake River on September 18, 2023. The discovery of quagga mussels in the Snake River marked the first time a rapid response plan had been put into action for quagga mussels in Idaho. 

The response to the quagga mussel detection in the Snake River is a major priority to the ISDA, Governor Little’s Office, as well as several federal, state and local agencies. The quagga mussel response is an ongoing effort for State of Idaho to protect our waters and way of life from a potentially devastating infestation. 

2025 Detection

Sampling data shows a 51% reduction in the quagga mussel impacted area of the Snake River near Twin Falls. Extensive sampling shows the area impacted by quagga mussels is approximately 3.5 river miles, which is down from an impact area of 7.2 miles in 2024. The results show significant progress and demonstrate the effectiveness of ISDA’s ongoing treatment strategy. 

No quagga mussels have been detected upriver or downriver of the 2024 treatment zone. Of concern to irrigators in the Magic Valley, no mussels have been detected in nearby reservoirs.  

Effectively treating the Snake River presents unique challenges due to the river’s complexity. Freshwater inputs in 2023 and 2024, along with varying river depths and flow rates have influenced how treatments dissipate to the target species. With an inventory of freshwater inputs and a detailed understanding of river dynamics, ISDA has developed a targeted treatment plan for 2025.  

ISDA is committed to a strategic, science-driven response to fully eradicate this invasive species and protect the state’s waterways. Similar to 2023 and 2024, ISDA has made its full treatment plan available to the public. The plan will be shaped by extensive ongoing sampling and careful evaluation of the Snake River’s complex flow patterns and site-specific dynamics. 

Containment measures

Today, the Snake River is open with a mandatory decontamination in place from Broken Bridge (Yingst Grade) and Hansen Bridge. Any watercraft or conveyance is required to be inspected prior to launch and decontaminated upon exit of the river. The inspection and decontamination stations are operating at Centennial Waterfront Park, Shoshone Falls, and Twin Falls Reservoir.

Throughout the 2023 and 2024 treatments, ISDA closed public access to the affected stretch of Mid Snake River. The closures were in place to minimize the potential spread of quagga mussels as well as prioritize the public’s safety.

View 2023 quagga mussel survey map.

View 2025 quagga mussel survey map.

delimiting surveys

To better understand the extent of the physical range of impacted area, ISDA staff survey the water in the Mid-Snake River area for quagga mussel larvae. ISDA staff and partners surveyed at a rapid pace to map out any other presence of quagga mussel larvae or adults in the area.

Samples from the Snake River are sent to a lab to identify any mussel larvae in the samples through microscopy. Any samples identified as possible quagga mussel are then transferred to another lab for PCR (genetic) confirmation.

Sampling occurs statewide as well as in surrounding lakes and reservoirs, upstream from Milner Dam to American Falls, and downstream to the Idaho Power Dam Complex at Hagerman. 

No mussels have been detected in nearby waterbodies.

Treatment Notifications

The ISDA along with several partners work to inform residents of the Magic Valley and all Idahoans of the quagga mussel response efforts. Communication to the public is a crucial aspect of the rapid response plan. The following communication methods were employed.